Monitoring of Viral Infections in Vegetable Crops in Agroecosystems of Ukraine

Authors

  • V.O. Tsvigun Institute of Agroecology and Environmental Management of NAAS, 12 Metrolohichna Str., Kyiv, 03143, Ukraine https://orcid.org/0000-0002-9517-9810
  • A.S. Levishko Institute of Agroecology and Environmental Management of NAAS, 12 Metrolohichna Str., Kyiv, 03143, Ukraine https://orcid.org/0000-0003-4037-1730
  • I.I. Gumeniuk Institute of Agroecology and Environmental Management of NAAS, 12 Metrolohichna Str., Kyiv, 03143, Ukraine
  • S.O. Mazur Institute of Agroecology and Environmental Management of NAAS, 12 Metrolohichna Str., Kyiv, 03143, Ukraine

DOI:

https://doi.org/10.15407/microbiolj86.05.087

Keywords:

cucumber mosaiс virus, potato virus X, tomato mosaic virus, tobacco mosaic virus, vegetable crops, monoinfection, mixed infection, monitoring

Abstract

Information on the abundance and diversity of phytopathogenic viruses in Ukraine is very variable and limited. There is a high importance of a complex study of the species composition and ways of spreading crop viruses, as well as the development of epiphytotic forecasting systems, which will help to limit the ranges of these viruses and save crop yields. Consequently, the aim of our study was to explore the species composition and frequency of mono- and mixed virus infection of vegetable crops in Ukrainian agrocenoses and to identify the possible etiology of its occurrence. Methods. The samples were analyzed for the presence of viral antigens by enzyme-linked immunosorbent assay in sandwich and indirect modifications. For the detection of viral antigens in ELISA, test systems manufactured by Loewe were used. To identify the virus, the material was homogenized and purified, and then registered on a reader. Results. The frequency of vegetable crops damaged by diseases of viral etiology increased by 25–27% compared to the previous years of the study. Serological analysis showed that 59% of the studied samples of the Cucurbitaceae family and 54% of the Solanaceae family were affected by the main viral diseases most common in Ukraine. The seed way of transmission of vegetable viruses in Ukraine was demonstrated as one of the sources of viruses in agrocenoses. The presence of antigens to cucumber mosaic virus (CMV) in 14.3% of the studied seeds, zucchini yellow mosaic virus (ZYMV) – 11.2%, and tomato mosaic virus (ToMV) – 12.6% was shown. This allows us to suggest that sowing those seeds in the future will contribute to the spread of these viruses across Ukraine. Analysis of soil samples showed the presence of antigens of cucumber mosaic virus, tobacco mosaic virus, and potato virus X. The lowest level of antigens to CMV was detected in the soils of Vinnytsia region, to PVX – in the Kyiv and Cherkasy regions, and to TMV – in the Odesa region. Conclusions. Vegetable agrocenoses in Ukraine are more often affected by viruses belonging to the Tobamovirus, Cucumovirus, Potyvirus, and Tospovirus genera of the Bromoviridae, Potyviridae, and Bunyaviridae families. In addition to the increasing areas of viral monoinfection, there is an active spread of mixed infection, or "superinfection", in Ukrainian agrocenosis. Mixed infections are mainly formed during the growth and development of the tested vegetable crops. All of this leads to further significant spread of not only mono- but also mixed virus infection of vegetable crops.

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References

Boiko, A. L. (Ed.). (2000). Workshop on general virology - Praktykum iz zahalnoi virusolohii. Vydavnychyi tsentr "Kyivskyi universytet" [In Ukrainian].

Çağlayan, K., Serçe, Ç. U., Gazel, M., & Jelkmann, W. (2006). Detection of Four Apple Viruses by ELISA and RT-PCR Assays in Turkey. Turkish Journal of Agriculture and Forestry, 30(4), 241-246.

Castello, J. D., Lakshman, D. K., Tavantzis, S. M., Rogers, S. O., Bachand, G. D., Jagels, R., Carlisle, R. J. J., & Liu, Y. (1995). Detection of infectious Tomato Mosaic Tobamovirus in fog and clouds. Phytopathology, 85(11), 1409-1412. https://doi.org/10.1094/Phyto-85-1409

Crowther, J. R. (1995). ELISA. Humana Press. https://doi.org/10.1385/0896032795

Curry, A., Appleton, H., & Dowsett, B. (2006). Application of transmission electron microscopy to the clinical study of viral and bacterial infections: Present and future. Micron, 37(2), 91-106. https://doi.org/10.1016/j.micron.2005.10.001

Delmiglio, C., & Pearson, M. N. (2006). Effects and incidence of Cucumber mosaic virus, Watermelon mosaic virus and Zucchini yellow mosaic virus in New Zealand's only native cucurbit, Sicyos australis. Australasian Plant Pathology, 35, 29-35. https://doi.org/10.1071/AP05098

Desbiez, C., Wipf-Scheibel, C., Millot, P., Berthier, K., Girardot, G., Gognalons, P., Hirsch, J., Moury, B., Nozeran, K., Piry, S., Schoeny, A., & Verdin, E. (2020). Distribution and evolution of the major viruses infecting cucurbitaceous and solanaceous crops in the French Mediterranean area. Virus Research, 286, 198042-198052. https://doi.org/10.1016/j.virusres.2020.198042

Furdychko, O., Boiko, A., Demianiuk, O., & Tsvihun, V. (2020). Virus diseases of plants in agrocenosis and forest ecosystems: diagnostics and prevention. Visnyk Agrarnoyi Nauky, 98(2), 5-11. [In Ukrainian]. https://doi.org/10.31073/agrovisnyk202002-01

Gilbert, G. S. (2002). Evolutionary ecology of plant diseases in natural ecosystems. Annual Review of Phytopathology, 40(1), 13-43. https://doi.org/10.1146/annurev.phyto.40.021202.110417

Khoury, M. J., Beaty, T. H., & Cohen, B. H. (1993). Fundamentals of Genetic Epidemiology. https://doi.org/10.1093/oso/9780195052886.001.0001

Kimura, M., Jia, Z.-J., Nakayama, N., & Asakawa, S. (2008). Ecology of viruses in soils: Past, present and future perspectives. Soil Science and Plant Nutrition, 54(1), 1-32. https://doi.org/10.1111/j.1747-0765.2007.00197.x

King, A., Adams, M., Carstens, E., & Lefkowitz, E. (Eds.). (2012). Virus Taxonomy: Ninth Report of the International Committee on Taxonomy of Viruses. Elsevier Academic Press.

Munkvold, G. P. (2009). Seed Pathology Progress in Academia and Industry. Annual Review of Phytopathology, 47(1), 285-311. https://doi.org/10.1146/annurev-phyto-080508-081916

Pozhylov, I., Rudnieva, T., Shevchenko, T., Shevchenko, O., & Tsvigun, V. (2019). Phylogenetic analysis of coat protein gene of tomato mosaic virus isolates circulating in Ukraine. Bulletin of Taras Shevchenko National University of Kyiv. Series: Biology, 77(1), 44-50. [In Ukrainian]. https://doi.org/10.17721/1728_2748.2019.77.44-50

Roossinck, M. J. (2008). Plant Virus Evolution. Springer Berlin Heidelberg. https://doi.org/10.1007/978-3-540-75763-4

Roossinck, M. J. (2015). Plants, viruses and the environment: Ecology and mutualism. Virology, 479(480), 271-277. https://doi.org/10.1016/j.virol.2015.03.041

Rudneva, T. O., Shevchenko, T. P., Budzanivska, I. G., Shevchenko, O. V., & Polischuk, V. P. (2006). Virus diseases of Cucurbitaceae plants on the territory of Ukraine. Rasteniev'dni Nauki, 43(6), 508-510.

Salvaudon, L., De Moraes, C. M., & Mescher, M. C. (2013). Outcomes of co-infection by two potyviruses: implications for the evolution of manipulative strategies. Proceedings of the Royal Society B: Biological Sciences, 280(1756), 2959-2968. https://doi.org/10.1098/rspb.2012.2959

Shevchenko, T. P., Tymchyshyn, O. V., Al Dalain, E., Bysov, A. S., Budzanivska, I. G., Shevchenko, O. V., & Polishchuk, V. P. (2015). The first evidence of subgroup IB isolates of Cucumber mosaic virus in Ukraine. Biopolymers and Cell, 31(1), 57-62. https://doi.org/10.7124/bc.0008CD

Shevchenko, T., Tymchyshyn, O., Kosenko, I., Budzanivska, I., & Polischuk, V. (2016). Potyviruses infecting vegetable crops in Ukraine. Bulletin of Taras Shevchenko National University of Kyiv. Series: Biology, 72(2), 48-52. https://doi.org/10.17721/1728_2748.2016.72.48-52

Shevchenko, T. P., Tymchyshyn, O. V., Kosenko, I. A., Budzanivska, I. G., Shevchenko, O. V., & Polishchuk, V. P. (2018). Molecular characterization and phylogenetic analysis of Ukrainian isolates of Cucumber mosaic virus based on the partial sequences of three genes. Biopolymers and Cell, 34(1), 32-40. https://doi.org/10.7124/bc.00096E

Shevchenko, O., Shevchenko, T., Snihur, H., & Budzanivska, I. (2021). Epidemiological patterns, prevalence and seasonal dynamics of different viruses in susceptible cucurbit crops. Agriculture and Forestry, 67(1), 73-82. https://doi.org/10.17707/AgricultForest.67.1.06

Silva-Rosales, L., Vargas, P., Alcalá-Briseño, R., & Casarrubias, K. (2019). Revisiting cross-protection in the form of antagonism: the case of Papaya mosaic virus protecting papaya plants against Papaya ringspot virus. Acta Horticulturae, 1250, 55-62. https://doi.org/10.17660/ActaHortic.2019.1250.9

Snihur, H., Shevchenko, T., Sherevera, K., Budzanivska, I., & Shevchenko, O. (2019). First report of onion yellow dwarf virus in Ukraine. Journal of Plant Pathology, 101(4), 1283-1283. https://doi.org/10.1007/s42161-019-00350-2

Thomas, W. (1973). Control of Olpidium brassicae, the vector of cucumher systemic necrosis and bean stipple streak virus diseases. New Zealand Journal of Experimental Agriculture, 1(1), 92-96. https://doi.org/10.1080/03015521.1973.10427624

Tsvigun, V., Shamraichuk, V., Bysov, A., Rudnieva, Т., Shevchenko, T., Polischuk, V. Vabishchevich, V., & Blotskaya, Zh. (2012). Novel viral pathogens of vegetable crops in Ukraine and Belarus. Bulletin of Taras Shevchenko, Kyiv National University. Biology, 62, 54-56.

Tsvihun, V. O., Shamraichuk, V. O., Rudnieva, T. O., Shevchenko, T. P., Bysov, A. S., & Polishchuk, V. P. (2012). Seed virus infection of Solanaceae - Nasinnieva virusna infektsiia roslyn Solanaceae. Ahroekolohichnyi zhurnal - Agroecological Journal, 3, 131-133. [In Ukrainian].

Tsvigun, V., Sus, N., Shevchenko, T., & Bojko, A. (2020). Biological properties of cucumber mosaic virus of vegetables. Visnyk Ahrarnoyi Nauky, 98(12), 26-31. [In Ukrainian]. https://doi.org/10.31073/agrovisnyk202012-04

Tsvigun, V., Sus, N., Mazur, S., Melnychuk, О., & Boyko, A. (2021). Distribution and biological features of tomato viral diseases in the agrocenoses of Ukraine. Ahroekolohichnyi zhurnal - Agroecological Journal, 4, 82-89. [In Ukrainian]. https://doi.org/10.33730/2077-4893.4.2021.252959

Zeng, R., Liao, Q., Feng, J., Li, D., & Chen, J. (2007). Synergy between cucumber mosaic virus and zucchini yellow mosaic virus on Cucurbitaceae hosts tested by real-time reverse transcription-polymerase chain reaction. Acta Biochimica et Biophysica Sinica, 39(6), 431-437. https://doi.org/10.1111/j.1745-7270.2007.00292.x

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Published

2024-10-31

How to Cite

Tsvigun, V., Levishko, A., Gumeniuk, I., & Mazur, S. (2024). Monitoring of Viral Infections in Vegetable Crops in Agroecosystems of Ukraine. Mikrobiolohichnyi Zhurnal, 86(5), 87-101. https://doi.org/10.15407/microbiolj86.05.087